Clusters
The clusters of the PepX database are listed here. You can change the cluster threshold (specifying the mean distance between any two complexes in a cluster) and the structural alignment (specifying the % of residues in the binding site that are aligned structurally). Read more about the clustering methodology.
| Cluster Images | Centroid Images |
Size |
Centroid PDB ID | Centroid Description |
|---|---|---|---|---|
  |
  |
1 | 1A2X | COMPLEX OF TROPONIN C WITH A 47 RESIDUE (1-47) FRAGMENT OF TROPONIN I |
  |
  |
1 | 1A3R | FAB FRAGMENT (ANTIBODY 8F5) COMPLEXED WITH PEPTIDE FROM HUMAN RHINOVIRUS (SEROTYPE 2) VIRAL CAPSID... |
  |
  |
1 | 1AB9 | CRYSTAL STRUCTURE OF BOVINE GAMMA-CHYMOTRYPSIN |
  |
  |
1 | 1AQC | X11 PTB DOMAIN-10MER PEPTIDE COMPLEX |
  |
  |
1 | 1AVF | ACTIVATION INTERMEDIATE 2 OF HUMAN GASTRICSIN FROM HUMAN STOMACH |
  |
  |
1 | 1AW8 | PYRUVOYL DEPENDENT ASPARTATE DECARBOXYLASE |
  |
  |
1 | 1BBR | THE STRUCTURE OF RESIDUES 7-16 OF THE A ALPHA CHAIN OF HUMAN FIBRINOGEN BOUND TO BOVINE THROMBIN AT... |
  |
  |
1 | 1BC5 | CHEMOTAXIS RECEPTOR RECOGNITION BY PROTEIN METHYLTRANSFERASE CHER |
  |
  |
1 | 1BJR | COMPLEX FORMED BETWEEN PROTEOLYTICALLY GENERATED LACTOFERRIN FRAGMENT AND PROTEINASE K |
  |
  |
1 | 1BT6 | P11 (S100A10), LIGAND OF ANNEXIN II IN COMPLEX WITH ANNEXIN II N-TERMINUS |
